* using log directory 'd:/Rcompile/CRANpkg/local/4.5/EpiReport.Rcheck' * using R Under development (unstable) (2024-10-08 r87214 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'EpiReport/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'EpiReport' version '1.0.2' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'EpiReport' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s] OK * checking whether the package can be loaded with stated dependencies ... [1s] OK * checking whether the package can be unloaded cleanly ... [1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s] OK * checking whether the namespace can be unloaded cleanly ... [1s] OK * checking loading without being on the library search path ... [1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [6s] OK * checking Rd files ... [1s] NOTE checkRd: (-1) getAgeGender.Rd:52: Lost braces in \itemize; meant \describe ? checkRd: (-1) getAgeGender.Rd:53: Lost braces in \itemize; meant \describe ? checkRd: (-1) getAgeGender.Rd:54: Lost braces in \itemize; meant \describe ? checkRd: (-1) getAgeGender.Rd:55: Lost braces in \itemize; meant \describe ? checkRd: (-1) getMap.Rd:44-45: Lost braces in \itemize; meant \describe ? checkRd: (-1) getMap.Rd:46-48: Lost braces in \itemize; meant \describe ? checkRd: (-1) getMap.Rd:49-51: Lost braces in \itemize; meant \describe ? checkRd: (-1) getSeason.Rd:55: Lost braces in \itemize; meant \describe ? checkRd: (-1) getSeason.Rd:56: Lost braces in \itemize; meant \describe ? checkRd: (-1) getSeason.Rd:57: Lost braces in \itemize; meant \describe ? checkRd: (-1) getSeason.Rd:58: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTableByMS.Rd:59: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTableByMS.Rd:60: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTableByMS.Rd:61-62: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTrend.Rd:55: Lost braces in \itemize; meant \describe ? checkRd: (-1) getTrend.Rd:56: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotAgeGender.Rd:45: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotAgeGender.Rd:46: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotAgeGender.Rd:47: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSeasonality.Rd:42: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSeasonality.Rd:43: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSeasonality.Rd:44: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotSeasonality.Rd:45: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotTS12MAvg.Rd:27: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotTS12MAvg.Rd:28: Lost braces in \itemize; meant \describe ? * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: getAgeGender.Rd: ggplot2, officer getMap.Rd: officer getSeason.Rd: ggplot2, officer getTableByMS.Rd: flextable, officer getTrend.Rd: ggplot2, officer plotAge.Rd: ggplot2 plotAgeGender.Rd: ggplot2 plotBar.Rd: ggplot2 plotBarGrouped.Rd: ggplot2 plotBarGroupedH.Rd: ggplot2 plotBarH.Rd: ggplot2 plotPie.Rd: ggplot2 plotSeasonality.Rd: ggplot2 plotTS.Rd: ggplot2 plotTS12MAvg.Rd: ggplot2 plotTSGrouped.Rd: ggplot2 shapeECDCFlexTable.Rd: set_header_df, flextable Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [1s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [12s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [20s] OK * checking PDF version of manual ... [29s] OK * checking HTML version of manual ... [6s] OK * DONE Status: 2 NOTEs