CRAN Package Check Results for Package CIDnetworks

Last updated on 2018-02-22 02:51:33 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.8.1 23.03 69.41 92.44 WARN
r-devel-linux-x86_64-debian-gcc 0.8.1 18.16 58.53 76.69 WARN
r-devel-linux-x86_64-fedora-clang 0.8.1 128.49 WARN
r-devel-linux-x86_64-fedora-gcc 0.8.1 124.67 WARN
r-devel-windows-ix86+x86_64 0.8.1 63.00 129.00 192.00 WARN
r-patched-linux-x86_64 0.8.1 18.99 77.48 96.47 NOTE
r-patched-solaris-x86 0.8.1 166.00 NOTE
r-release-linux-x86_64 0.8.1 17.49 74.77 92.26 NOTE
r-release-windows-ix86+x86_64 0.8.1 48.00 166.00 214.00 NOTE
r-release-osx-x86_64 0.8.1 NOTE
r-oldrel-windows-ix86+x86_64 0.8.1 36.00 128.00 164.00 NOTE
r-oldrel-osx-x86_64 0.8.1 NOTE

Check Details

Version: 0.8.1
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Note: possible error in 'log.likelihood(list(latent.space.pos.prop, ': unused argument (edge.list.rows[[dd]])
     Note: possible error in 'log.likelihood(list(latent.space.pos.hold, ': unused argument (edge.list.rows[[dd]])
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 0.8.1
Check: R code for possible problems
Result: NOTE
    BETAcid: no visible global function definition for ‘new’
    CID: no visible global function definition for ‘is’
    CID.Gibbs: no visible global function definition for ‘is’
    CIDnetwork: no visible global function definition for ‘new’
    COV.plot: no visible global function definition for ‘par’
    COV.plot: no visible global function definition for ‘pairs’
    COVARIATEcid: no visible global function definition for ‘new’
    HBMcid: no visible global function definition for ‘new’
    LSMcid: no visible global function definition for ‘new’
    LVMcid: no visible global function definition for ‘new’
    MMSBMcid: no visible global function definition for ‘new’
    SBMcid: no visible global function definition for ‘new’
    SRcid: no visible global function definition for ‘new’
    block.membership.plot: no visible global function definition for ‘rgb’
    block.membership.plot: no visible global function definition for ‘rect’
    block.membership.plot: no visible global function definition for ‘text’
    circular.dendrogram: no visible global function definition for ‘lines’
    circular.dendrogram: no visible global function definition for ‘text’
    circular.dendrogram: no visible global function definition for
     ‘segments’
    circular.dendrogram: no visible global function definition for ‘points’
    color.block.one: no visible global function definition for ‘rgb’
    dotchart.coef: no visible global function definition for ‘box’
    dotchart.coef: no visible global function definition for ‘axis’
    dotchart.coef: no visible global function definition for ‘abline’
    dotchart.coef: no visible global function definition for ‘points’
    dotchart.coef: no visible global function definition for ‘text’
    dotchart.coef: no visible global function definition for ‘segments’
    dotchart.two: no visible global function definition for ‘segments’
    dotchart.two: no visible global function definition for ‘text’
    get.blocks: no visible global function definition for ‘is’
    getModeLS: no visible global function definition for ‘is’
    image.netplot: no visible global function definition for
     ‘colorRampPalette’
    image.netplot: no visible global function definition for ‘rect’
    image.netplot: no visible global function definition for ‘text’
    intercept.plot: no visible global function definition for ‘quantile’
    intercept.plot: no visible global function definition for ‘points’
    intercept.plot: no visible global function definition for ‘arrows’
    intercept.plot: no visible global function definition for ‘abline’
    latent.space.plot: no visible global function definition for ‘text’
    latent.space.plot: no visible global function definition for ‘segments’
    mat.cov.to.edge.list.cov: no visible global function definition for
     ‘is’
    ordinal.maker: no visible global function definition for ‘quantile’
    project.into.2d: no visible global function definition for ‘princomp’
    rdirichlet.block: no visible global function definition for ‘rgamma’
    rdirichlet.one: no visible global function definition for ‘rgamma’
    simple.split: no visible global function definition for ‘rbinom’
    unittest.xtx: no visible global function definition for ‘rnorm’
    value.mat: no visible global function definition for ‘pnorm’
    value.mat.mean: no visible global function definition for ‘pnorm’
    Undefined global functions or variables:
     abline arrows axis box colorRampPalette is lines new pairs par pnorm
     points princomp quantile rbinom rect rgamma rgb rnorm segments text
    Consider adding
     importFrom("grDevices", "colorRampPalette", "rgb")
     importFrom("graphics", "abline", "arrows", "axis", "box", "lines",
     "pairs", "par", "points", "rect", "segments", "text")
     importFrom("methods", "is", "new")
     importFrom("stats", "pnorm", "princomp", "quantile", "rbinom",
     "rgamma", "rnorm")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.8.1
Check: compiled code
Result: NOTE
    File ‘CIDnetworks/libs/CIDnetworks.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64