CRAN Package Check Results for Package FME

Last updated on 2021-01-23 23:47:14 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.3.6.1 9.55 239.18 248.73 OK
r-devel-linux-x86_64-debian-gcc 1.3.6.1 6.43 173.55 179.98 OK
r-devel-linux-x86_64-fedora-clang 1.3.6.1 294.39 OK
r-devel-linux-x86_64-fedora-gcc 1.3.6.1 303.24 OK
r-devel-windows-ix86+x86_64 1.3.6.1 16.00 326.00 342.00 OK
r-patched-linux-x86_64 1.3.6.1 8.40 225.14 233.54 OK
r-patched-solaris-x86 1.3.6.1 331.00 OK
r-release-linux-x86_64 1.3.6.1 7.03 227.27 234.30 WARN
r-release-macos-x86_64 1.3.6.1 OK
r-release-windows-ix86+x86_64 1.3.6.1 12.00 298.00 310.00 WARN
r-oldrel-macos-x86_64 1.3.6.1 OK
r-oldrel-windows-ix86+x86_64 1.3.6.1 13.00 305.00 318.00 OK

Check Details

Version: 1.3.6.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘FME.Rnw’ using Sweave
    Loading required package: deSolve
    Loading required package: rootSolve
    Loading required package: coda
    Error: processing vignette 'FME.Rnw' failed with diagnostics:
    Running ‘texi2dvi’ on ‘FME.tex’ failed.
    LaTeX errors:
    ! Undefined control sequence.
    <recently read> \Hy@colorlink
    
    l.84 \begin{document}
    
    ! Undefined control sequence.
    \close@pdflink ->\Hy@endcolorlink
     \Hy@VerboseLinkStop \pdfendlink
    l.84 \begin{document}
    
    ! Undefined control sequence.
    <recently read> \Hy@colorlink
    
    l.84 \begin{document}
    
    ! Undefined control sequence.
    \close@pdflink ->\Hy@endcolorlink
     \Hy@VerboseLinkStop \pdfendlink
    l.84 \begin{document}
    
    ! Undefined control sequence.
    \hyper@linkurl ...tionraw >>}\relax \Hy@colorlink
     \@urlcolor #1\Hy@xspace@en...
    l.84 \begin{document}
    
    ! Undefined control sequence.
    \close@pdflink ->\Hy@endcolorlink
     \Hy@VerboseLinkStop \pdfendlink
    l.84 \begin{document}
    
    --- failed re-building ‘FME.Rnw’
    
    --- re-building ‘FMEdyna.Rnw’ using Sweave
    Loading required package: deSolve
    Loading required package: rootSolve
    Loading required package: coda
    Error: processing vignette 'FMEdyna.Rnw' failed with diagnostics:
    Running ‘texi2dvi’ on ‘FMEdyna.tex’ failed.
    LaTeX errors:
    ! Undefined control sequence.
    <recently read> \Hy@colorlink
    
    l.79 \begin{document}
    
    ! Undefined control sequence.
    \close@pdflink ->\Hy@endcolorlink
     \Hy@VerboseLinkStop \pdfendlink
    l.79 \begin{document}
    
    ! Undefined control sequence.
    <recently read> \Hy@colorlink
    
    l.79 \begin{document}
    
    ! Undefined control sequence.
    \close@pdflink ->\Hy@endcolorlink
     \Hy@VerboseLinkStop \pdfendlink
    l.79 \begin{document}
    
    --- failed re-building ‘FMEdyna.Rnw’
    
    --- re-building ‘FMEmcmc.Rnw’ using Sweave
    Loading required package: deSolve
    Loading required package: rootSolve
    Loading required package: coda
    Error: processing vignette 'FMEmcmc.Rnw' failed with diagnostics:
    Running ‘texi2dvi’ on ‘FMEmcmc.tex’ failed.
    LaTeX errors:
    ! Undefined control sequence.
    <recently read> \Hy@colorlink
    
    l.72 \begin{document}
    
    ! Undefined control sequence.
    \close@pdflink ->\Hy@endcolorlink
     \Hy@VerboseLinkStop \pdfendlink
    l.72 \begin{document}
    
    ! Undefined control sequence.
    <recently read> \Hy@colorlink
    
    l.72 \begin{document}
    
    ! Undefined control sequence.
    \close@pdflink ->\Hy@endcolorlink
     \Hy@VerboseLinkStop \pdfendlink
    l.72 \begin{document}
    
    ! Undefined control sequence.
    <recently read> \Hy@colorlink
    
    l.72 \begin{document}
    
    ! Undefined control sequence.
    \close@pdflink ->\Hy@endcolorlink
     \Hy@VerboseLinkStop \pdfendlink
    l.72 \begin{document}
    
    ! Undefined control sequence.
    <recently read> \Hy@colorlink
    
    l.72 \begin{document}
    
    ! Undefined control sequence.
    \close@pdflink ->\Hy@endcolorlink
     \Hy@VerboseLinkStop \pdfendlink
    l.72 \begin{document}
    
    --- failed re-building ‘FMEmcmc.Rnw’
    
    --- re-building ‘FMEother.Rnw’ using Sweave
    Loading required package: deSolve
    Loading required package: rootSolve
    Loading required package: coda
    Error: processing vignette 'FMEother.Rnw' failed with diagnostics:
    Running ‘texi2dvi’ on ‘FMEother.tex’ failed.
    LaTeX errors:
    ! Undefined control sequence.
    <recently read> \Hy@colorlink
    
    l.81 \begin{document}
    
    ! Undefined control sequence.
    \close@pdflink ->\Hy@endcolorlink
     \Hy@VerboseLinkStop \pdfendlink
    l.81 \begin{document}
    
    ! Undefined control sequence.
    <recently read> \Hy@colorlink
    
    l.81 \begin{document}
    
    ! Undefined control sequence.
    \close@pdflink ->\Hy@endcolorlink
     \Hy@VerboseLinkStop \pdfendlink
    l.81 \begin{document}
    
    --- failed re-building ‘FMEother.Rnw’
    
    --- re-building ‘FMEsteady.Rnw’ using Sweave
    Loading required package: deSolve
    Loading required package: rootSolve
    Loading required package: coda
    Error: processing vignette 'FMEsteady.Rnw' failed with diagnostics:
    Running ‘texi2dvi’ on ‘FMEsteady.tex’ failed.
    LaTeX errors:
    ! Undefined control sequence.
    <recently read> \Hy@colorlink
    
    l.82 \begin{document}
    
    ! Undefined control sequence.
    \close@pdflink ->\Hy@endcolorlink
     \Hy@VerboseLinkStop \pdfendlink
    l.82 \begin{document}
    
    ! Undefined control sequence.
    <recently read> \Hy@colorlink
    
    l.82 \begin{document}
    
    ! Undefined control sequence.
    \close@pdflink ->\Hy@endcolorlink
     \Hy@VerboseLinkStop \pdfendlink
    l.82 \begin{document}
    
    --- failed re-building ‘FMEsteady.Rnw’
    
    SUMMARY: processing the following files failed:
     ‘FME.Rnw’ ‘FMEdyna.Rnw’ ‘FMEmcmc.Rnw’ ‘FMEother.Rnw’ ‘FMEsteady.Rnw’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-linux-x86_64

Version: 1.3.6.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building 'FME.Rnw' using Sweave
    Loading required package: deSolve
    Loading required package: rootSolve
    Loading required package: coda
    --- finished re-building 'FME.Rnw'
    
    --- re-building 'FMEdyna.Rnw' using Sweave
    Loading required package: deSolve
    Loading required package: rootSolve
    Loading required package: coda
    --- finished re-building 'FMEdyna.Rnw'
    
    --- re-building 'FMEmcmc.Rnw' using Sweave
    Loading required package: deSolve
    Loading required package: rootSolve
    Loading required package: coda
    Warning in system(paste(shQuote(texi2dvi), if (quiet) "--quiet" else "", :
     running command '"D:\compiler\texmf\miktex\bin\texify.exe" --quiet --pdf "FMEmcmc.tex" --max-iterations=20 -I "D:/RCompile/recent/R-4.0.3/share/texmf/tex/latex" -I "D:/RCompile/recent/R-4.0.3/share/texmf/bibtex/bst"' had status 1
    Error: processing vignette 'FMEmcmc.Rnw' failed with diagnostics:
    Failed to locate 'texi2pdf' output file 'FMEmcmc.pdf' for vignette with name 'FMEmcmc' and engine 'utils::Sweave'. The following files exist in working directory 'd:\RCompile\CRANpkg\local\4.0\FME.Rcheck\vign_test\FME\vignettes': 'FME-HIV.pdf' (320096 bytes), 'FME-collfig.pdf' (4692 bytes), 'FME-costfig.pdf' (4385 bytes), 'FME-crlfig.pdf' (186035 bytes), 'FME-fitfig.pdf' (8499 bytes), 'FME-mcmcfig.pdf' (209880 bytes), 'FME-mcmcfig2.pdf' (475162 bytes), 'FME-odefig.pdf' (9195 bytes), 'FME-sf.pdf' (5740 bytes), 'FME-sfunfig.pdf' (6451 bytes), 'FME-sfunpfig.pdf' (46664 bytes), 'FME-srfig.pdf' (8615 bytes), 'FME.Rnw' (53557 bytes), 'FME.aux' (8536 bytes), 'FME.bbl' (10166 bytes), 'FME.blg' (126 bytes), 'FME.log' (30426 bytes), 'FME.out' (1115 bytes), 'FME.pdf' (1.71553e+06 bytes), 'FME.tex' (58040 bytes), 'FMEdyna-collfig.pdf' (4509 bytes), 'FMEdyna-crl2fig.pdf' (31143 bytes), 'FMEdyna-crlfig.pdf' (16563 bytes), 'FMEdyna-cumuplot.pdf' (27301 bytes), 'FMEdyna-distfig.pdf' (73579 bytes), 'FMEdyna-fitfig.pdf' (6217 bytes), 'FMEdyna-mcmcfig.pdf' (38642 bytes), 'FMEdyna-mcmcfig2.pdf' (28930 bytes), 'FMEdyna-odefig.pdf' (6080 bytes), 'FMEdyna-pairsfig.pdf' (59973 bytes), 'FMEdyna-resfig.pdf' (4440 bytes), 'FMEdyna-sensfig.pdf' (13387 bytes), 'FMEdyna-sensfig2.pdf' (7357 bytes), 'FMEdyna-sfunfig.pdf' (6666 bytes), 'FMEdyna.Rnw' (27531 bytes), 'FMEdyna.aux' (5716 bytes), 'FMEdyna.bbl' (3748 bytes), 'FMEdyna.blg' (130 bytes), 'FMEdyna.log' (36409 bytes), 'FMEdyna.out' (1543 bytes), 'FMEdyna.pdf' (641153 bytes), 'FMEdyna.tex' (40784 bytes), 'FMEmcmc-ABMCMC.pdf' (79800 bytes), 'FMEmcmc-ABMCMC2.pdf' (68035 bytes), 'FMEmcmc-ABMCMC3.pdf' (59886 bytes), 'FMEmcmc-Monmcmc.pdf' (33278 bytes), 'FMEmcmc-Monmcmc2.pdf' (28333 bytes), 'FMEmcmc-banana2.pdf' (194549 bytes), 'FMEmcmc-hist.pdf' (7422 bytes), 'FMEmcmc-hist1.pdf' (20825 bytes), 'FMEmcmc-logp.pdf' (40971 bytes), 'FMEmcmc-logp1.pdf' (41911 bytes), 'FMEmcmc-obs.pdf' (7331 bytes), 'FMEmcmc-sr.pdf' (6763 bytes), 'FMEmcmc.Rnw' (25317 bytes), 'FMEmcmc.tex' (33192 bytes), 'FMEother.Rnw' (9798 bytes), 'FMEsteady.Rnw' (12465 bytes), 'Rplots.pdf' (643072 bytes), 'mcmc.Rdata' (89187 bytes), 'vignettes.bib' (12810 bytes)
    --- failed re-building 'FMEmcmc.Rnw'
    
    --- re-building 'FMEother.Rnw' using Sweave
    Loading required package: deSolve
    Loading required package: rootSolve
    Loading required package: coda
    --- finished re-building 'FMEother.Rnw'
    
    --- re-building 'FMEsteady.Rnw' using Sweave
    Loading required package: deSolve
    Loading required package: rootSolve
    Loading required package: coda
    --- finished re-building 'FMEsteady.Rnw'
    
    SUMMARY: processing the following file failed:
     'FMEmcmc.Rnw'
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-windows-ix86+x86_64