CRAN Package Check Results for Package FastImputation

Last updated on 2018-05-24 02:48:21 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.0 1.51 30.87 32.38 OK
r-devel-linux-x86_64-debian-gcc 2.0 1.15 27.63 28.78 OK
r-devel-linux-x86_64-fedora-clang 2.0 40.92 OK
r-devel-linux-x86_64-fedora-gcc 2.0 38.08 OK
r-devel-windows-ix86+x86_64 2.0 3.00 39.00 42.00 OK
r-patched-linux-x86_64 2.0 1.04 28.93 29.97 OK
r-patched-solaris-x86 2.0 55.60 OK
r-release-linux-x86_64 2.0 0.89 28.89 29.78 OK
r-release-windows-ix86+x86_64 2.0 4.00 59.00 63.00 OK
r-release-osx-x86_64 2.0 OK
r-oldrel-windows-ix86+x86_64 2.0 4.00 54.00 58.00 OK
r-oldrel-osx-x86_64 2.0 ERROR

Check Details

Version: 2.0
Check: examples
Result: ERROR
    Running examples in ‘FastImputation-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: FastImputation
    > ### Title: Use the pattern learned from the training data to impute (fill
    > ### in good guesses for) missing values.
    > ### Aliases: FastImputation
    >
    > ### ** Examples
    >
    > data(FI_train) # provides FItrain dataset
    > patterns <- TrainFastImputation(
    + FI_train,
    + constraints=list(list("bounded_below_2", list(lower=0)),
    + list("bounded_above_5", list(upper=0)),
    + list("bounded_above_and_below_6", list(lower=0, upper=1))
    + ),
    + idvars="user_id_1",
    + categorical="categorical_9")
    Warning in FUN(X[[i]], ...) :
     More than one constraint specified for variable 1
    >
    > data(FI_test)
    > FI_test # note there is missing data
     user_id_1 bounded_below_2 unbounded_3 unbounded_4 bounded_above_5
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    10003 user10003 6.701044e-01 2.59744678 1.8078093302 -4.445718e-01
    10004 user10004 3.496679e-01 NA -0.9144677342 -1.649258e+00
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    10006 user10006 1.775034e-01 -2.23879469 0.3686458866 -1.263723e-01
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    10015 user10015 1.630978e-01 2.43310591 -1.1987407018 -2.525325e+02
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    10023 user10023 NA 0.98211508 0.0838916821 -1.616274e-01
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    10035 user10035 2.705498e+01 0.68036202 1.3912772607 -6.690156e-01
    10036 user10036 5.444630e-03 NA 1.1842490584 -9.817641e-02
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    10184 user10184 1.422818e-01 0.15983554 0.1993579131 NA
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    10201 user10201 1.949230e-01 1.23008399 -0.1563108585 -5.103193e+00
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    10157 9.884990e-01 1.175021074 -0.78502199 B
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    10164 8.631983e-01 NA -1.17598736 C
    10165 8.930081e-03 -2.179178441 0.14815316 A
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    10168 9.803094e-01 -1.509798159 -2.74586394 B
    10169 9.514482e-01 1.042909384 -1.44844103 C
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    10198 1.182893e-05 NA 3.58688795 A
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    10217 1.913905e-01 -1.120751116 1.11710992 C
    10218 9.641708e-01 1.445506253 NA C
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    10220 9.972638e-01 0.878677684 NA C
    10221 1.000000e+00 -0.267381828 -6.28183441 A
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    10228 2.439535e-06 -1.309455641 4.26351817 <NA>
    10229 1.895697e-02 0.496253212 1.06468251 C
    10230 9.216237e-01 -0.674831760 -0.59165117 C
    10231 1.020146e-01 1.289415055 1.41064894 B
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    10234 9.477671e-01 1.607055368 0.68459616 B
    10235 2.198709e-05 -0.723501662 3.60842986 C
    10236 1.190910e-01 1.072666179 2.02039399 B
    10237 5.882773e-02 0.719163013 5.43524702 C
    10238 5.161093e-01 NA -1.31410940 B
    10239 1.262476e-01 -1.541882408 -3.87092324 A
    10240 6.391260e-02 1.940371810 4.29272611 B
    10241 2.797724e-14 0.551876542 9.07203811 C
    10242 3.328070e-05 -1.919350529 1.91000986 C
    10243 9.999377e-01 0.716034901 NA B
    10244 2.029122e-07 0.052458871 5.18462309 C
    10245 2.576975e-01 -0.926542641 0.99535813 C
    10246 2.241921e-01 0.206820987 -0.23644545 C
    10247 9.999985e-01 2.792584066 -0.21183446 B
    10248 9.969750e-01 0.329724857 -0.89919518 B
    10249 NA -0.746986370 3.06693473 B
    10250 9.995410e-01 NA -2.24014224 B
    > imputed_data <- FastImputation(FI_test, patterns)
    
     |
     | | 0%
     |
     |= | 1%
     *** caught segfault ***
    address 0x7fd9e5a43de0, cause 'memory not mapped'
    
    Traceback:
     1: `[<-.data.frame`(`*tmp*`, i_row, cols_to_impute, value = <S4 object of class "dgeMatrix">)
     2: `[<-`(`*tmp*`, i_row, cols_to_impute, value = <S4 object of class "dgeMatrix">)
     3: FastImputation(FI_test, patterns)
    An irrecoverable exception occurred. R is aborting now ...
Flavor: r-oldrel-osx-x86_64