CRAN Package Check Results for Package IDConverter

Last updated on 2022-12-07 20:55:59 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.3 5.44 56.85 62.29 OK
r-devel-linux-x86_64-debian-gcc 0.3.3 4.32 41.59 45.91 OK
r-devel-linux-x86_64-fedora-clang 0.3.3 86.16 OK
r-devel-linux-x86_64-fedora-gcc 0.3.3 80.21 OK
r-devel-windows-x86_64 0.3.3 19.00 89.00 108.00 OK
r-patched-linux-x86_64 0.3.3 4.90 52.23 57.13 OK
r-release-linux-x86_64 0.3.3 5.37 51.81 57.18 OK
r-release-macos-arm64 0.3.3 48.00 OK
r-release-macos-x86_64 0.3.3 80.00 OK
r-release-windows-x86_64 0.3.3 16.00 98.00 114.00 OK
r-oldrel-macos-arm64 0.3.3 55.00 OK
r-oldrel-macos-x86_64 0.3.3 69.00 OK
r-oldrel-windows-ix86+x86_64 0.3.3 12.00 78.00 90.00 ERROR

Check Details

Version: 0.3.3
Check: tests
Result: ERROR
     Running 'testthat.R' [5s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(IDConverter)
     >
     > test_check("IDConverter")
     trying URL 'https://zenodo.org/record/6342397/files/icgc.rda'
     trying URL 'https://zenodo.org/record/6342397/files/pcawg_full.rda'
     trying URL 'https://zenodo.org/record/6342397/files/pcawg_full.rda'
     trying URL 'https://zenodo.org/record/6342397/files/pcawg_full.rda'
     trying URL 'https://zenodo.org/record/6342397/files/pcawg_full.rda'
     trying URL 'https://zenodo.org/record/6342397/files/icgc.rda'
     trying URL 'https://zenodo.org/record/6342397/files/tcga.rda'
     trying URL 'https://zenodo.org/record/6342397/files/pcawg_full.rda'
     [ FAIL 4 | WARN 32 | SKIP 0 | PASS 4 ]
    
     == Failed tests ================================================================
     -- Failure ('test-roxytest-testexamples-convert_icgc.R:13'): Function convert_icgc() @ L25 --
     `convert_pcawg("SA170678")` did not throw an error.
     -- Failure ('test-roxytest-testexamples-convert_pcawg.R:19'): Function convert_pcawg() @ L38 --
     `convert_pcawg("SA5213")` did not throw an error.
     -- Failure ('test-roxytest-testexamples-convert_pcawg.R:21'): Function convert_pcawg() @ L38 --
     `convert_icgc("SP1677", from = "icgc_specimen_id", to = "xx")` did not throw an error.
     -- Failure ('test-roxytest-testexamples-convert_tcga.R:13'): Function convert_tcga() @ L24 --
     `convert_pcawg("TCGA-02-0001-10A-01W-0188-10")` did not throw an error.
    
     [ FAIL 4 | WARN 32 | SKIP 0 | PASS 4 ]
     Error: Test failures
     Execution halted
Flavor: r-oldrel-windows-ix86+x86_64