CRAN Package Check Results for Package NMF

Last updated on 2019-01-23 08:49:13 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.21.0 25.82 602.30 628.12 OK
r-devel-linux-x86_64-debian-gcc 0.21.0 20.69 463.93 484.62 OK
r-devel-linux-x86_64-fedora-clang 0.21.0 728.02 OK
r-devel-linux-x86_64-fedora-gcc 0.21.0 714.46 OK
r-devel-windows-ix86+x86_64 0.21.0 53.00 847.00 900.00 OK
r-patched-linux-x86_64 0.21.0 17.64 556.90 574.54 OK
r-patched-solaris-x86 0.21.0 251.00 ERROR --no-build-vignettes
r-release-linux-x86_64 0.21.0 24.39 557.31 581.70 OK
r-release-windows-ix86+x86_64 0.21.0 42.00 719.00 761.00 OK
r-release-osx-x86_64 0.21.0 NOTE
r-oldrel-windows-ix86+x86_64 0.21.0 29.00 958.00 987.00 OK
r-oldrel-osx-x86_64 0.21.0 NOTE

Check Details

Version: 0.21.0
Flags: --no-build-vignettes
Check: examples
Result: ERROR
    Running examples in ‘NMF-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: NMFfitX-class
    > ### Title: Virtual Class to Handle Results from Multiple Runs of NMF
    > ### Algorithms
    > ### Aliases: NMFfitX-class
    >
    > ### ** Examples
    >
    > ## Don't show:
    > # roxygen generated flag
    > options(R_CHECK_RUNNING_EXAMPLES_=TRUE)
    > ## End(Don't show)
    >
    > # generate a synthetic dataset with known classes
    > n <- 20; counts <- c(5, 2, 3);
    > V <- syntheticNMF(n, counts)
    >
    > # perform multiple runs of one algorithm (default is to keep only best fit)
    > res <- nmf(V, 3, nrun=3)
    # NOTE - CRAN check detected: limiting maximum number of cores [2/16]
    Error in big.matrix(nrow = nrow(x), ncol = ncol(x), type = type, init = NULL, :
     Error: memory could not be allocated for instance of type big.matrix
    Calls: nmf ... gVariable -> <Anonymous> -> <Anonymous> -> big.matrix
    Timing stopped at: 0.032 0.036 0.069
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.21.0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘doMPI’
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64