CRAN Package Check Results for Package NNLM

Last updated on 2019-03-23 02:52:11 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.4.2 58.07 321.83 379.90 ERROR
r-devel-linux-x86_64-debian-gcc 0.4.2 47.86 320.56 368.42 ERROR
r-devel-linux-x86_64-fedora-clang 0.4.2 477.21 ERROR
r-devel-linux-x86_64-fedora-gcc 0.4.2 478.24 ERROR
r-devel-windows-ix86+x86_64 0.4.2 162.00 428.00 590.00 ERROR
r-patched-linux-x86_64 0.4.2 59.59 403.15 462.74 OK
r-patched-solaris-x86 0.4.2 603.90 OK
r-release-linux-x86_64 0.4.2 55.84 397.43 453.27 OK
r-release-windows-ix86+x86_64 0.4.2 111.00 410.00 521.00 OK
r-release-osx-x86_64 0.4.2 OK
r-oldrel-windows-ix86+x86_64 0.4.2 107.00 481.00 588.00 OK
r-oldrel-osx-x86_64 0.4.2 OK

Additional issues

clang-UBSAN gcc-UBSAN

Check Details

Version: 0.4.2
Check: use of SHLIB_OPENMP_*FLAGS in Makefiles
Result: NOTE
     src/Makevars: SHLIB_OPENMP_CXXFLAGS is included in PKG_LIBS but not in PKG_CXXFLAGS
     src/Makevars: it is not portable to include SHLIB_OPENMP_*' macros in PKG_CPPFLAGS
    Use of these macros is discussed in sect 1.2.1.1 of 'Writing R
    Extensions'. The macros for different languages may differ so the
    matching macro must be used in PKG_CXXFLAGS (etc) and match that used
    in PKG_LIBS (except for Fortran: see the manual).
    PKG_CPPFLAGS is used for both C and C++ code so it is not portable to
    use it for these macros.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.4.2
Check: tests
Result: ERROR
     Running 'testthat.R' [4s/5s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(NNLM)
     >
     > test_check("NNLM")
     -- 1. Failure: Testing nnlm result (@test-nnlm.R#32) --------------------------
     as.vector(sol3) not equal to c(...).
     7/10 mismatches (average diff: 3.71)
     [1] 10.47 - 4.466 == 6
     [3] 5.42 - 9.422 == -4
     [4] 2.83 - 0.832 == 2
     [5] 9.04 - 6.036 == 3
     [7] 1.86 - 2.860 == -1
     [8] 7.32 - 4.318 == 3
     [9] 1.80 - 8.799 == -7
    
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     Non-negative matrix factorization:
     Algorithm: Sequential coordinate-wise descent
     Loss: Mean squared error
     MSE: 0.002684981
     MKL: 0.00207581
     Target: 0.002486645
     Rel. tol.: 9.84e-05
     Total epochs: 6177
     # Interation: 263
     Running time:
     user system elapsed
     0.027 0.000 0.026
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     == testthat results ===========================================================
     OK: 29 SKIPPED: 0 FAILED: 1
     1. Failure: Testing nnlm result (@test-nnlm.R#32)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.4.2
Check: tests
Result: ERROR
     Running ‘testthat.R’ [61s/51s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(NNLM)
     >
     > test_check("NNLM")
     ── 1. Failure: Testing nnlm result (@test-nnlm.R#32) ──────────────────────────
     as.vector(sol3) not equal to c(...).
     7/10 mismatches (average diff: 3.71)
     [1] 10.47 - 4.466 == 6
     [3] 5.42 - 9.422 == -4
     [4] 2.83 - 0.832 == 2
     [5] 9.04 - 6.036 == 3
     [7] 1.86 - 2.860 == -1
     [8] 7.32 - 4.318 == 3
     [9] 1.80 - 8.799 == -7
    
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     Non-negative matrix factorization:
     Algorithm: Sequential coordinate-wise descent
     Loss: Mean squared error
     MSE: 0.002684981
     MKL: 0.00207581
     Target: 0.002486645
     Rel. tol.: 9.84e-05
     Total epochs: 6177
     # Interation: 263
     Running time:
     user system elapsed
     1.073 0.000 0.928
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 29 SKIPPED: 0 FAILED: 1
     1. Failure: Testing nnlm result (@test-nnlm.R#32)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.4.2
Check: tests
Result: ERROR
     Running ‘testthat.R’
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(NNLM)
     >
     > test_check("NNLM")
     ── 1. Failure: Testing nnlm result (@test-nnlm.R#32) ──────────────────────────
     as.vector(sol3) not equal to c(...).
     7/10 mismatches (average diff: 3.71)
     [1] 10.47 - 4.466 == 6
     [3] 5.42 - 9.422 == -4
     [4] 2.83 - 0.832 == 2
     [5] 9.04 - 6.036 == 3
     [7] 1.86 - 2.860 == -1
     [8] 7.32 - 4.318 == 3
     [9] 1.80 - 8.799 == -7
    
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     Non-negative matrix factorization:
     Algorithm: Sequential coordinate-wise descent
     Loss: Mean squared error
     MSE: 0.002684981
     MKL: 0.00207581
     Target: 0.002486645
     Rel. tol.: 9.84e-05
     Total epochs: 6177
     # Interation: 263
     Running time:
     user system elapsed
     0.035 0.000 0.036
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 29 SKIPPED: 0 FAILED: 1
     1. Failure: Testing nnlm result (@test-nnlm.R#32)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.4.2
Check: tests
Result: ERROR
     Running ‘testthat.R’
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(NNLM)
     >
     > test_check("NNLM")
     ── 1. Failure: Testing nnlm result (@test-nnlm.R#32) ──────────────────────────
     as.vector(sol3) not equal to c(...).
     7/10 mismatches (average diff: 3.71)
     [1] 10.47 - 4.466 == 6
     [3] 5.42 - 9.422 == -4
     [4] 2.83 - 0.832 == 2
     [5] 9.04 - 6.036 == 3
     [7] 1.86 - 2.860 == -1
     [8] 7.32 - 4.318 == 3
     [9] 1.80 - 8.799 == -7
    
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     Non-negative matrix factorization:
     Algorithm: Sequential coordinate-wise descent
     Loss: Mean squared error
     MSE: 0.002684981
     MKL: 0.00207581
     Target: 0.002486645
     Rel. tol.: 9.84e-05
     Total epochs: 6177
     # Interation: 263
     Running time:
     user system elapsed
     0.029 0.000 0.030
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 29 SKIPPED: 0 FAILED: 1
     1. Failure: Testing nnlm result (@test-nnlm.R#32)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.4.2
Check: running tests for arch ‘i386’
Result: ERROR
     Running 'testthat.R' [12s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(NNLM)
     >
     > test_check("NNLM")
     -- 1. Failure: Testing nnlm result (@test-nnlm.R#32) --------------------------
     as.vector(sol3) not equal to c(...).
     7/10 mismatches (average diff: 3.71)
     [1] 10.47 - 4.466 == 6
     [3] 5.42 - 9.422 == -4
     [4] 2.83 - 0.832 == 2
     [5] 9.04 - 6.036 == 3
     [7] 1.86 - 2.860 == -1
     [8] 7.32 - 4.318 == 3
     [9] 1.80 - 8.799 == -7
    
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     Non-negative matrix factorization:
     Algorithm: Sequential coordinate-wise descent
     Loss: Mean squared error
     MSE: 0.002684981
     MKL: 0.00207581
     Target: 0.002486645
     Rel. tol.: 9.84e-05
     Total epochs: 6177
     # Interation: 263
     Running time:
     user system elapsed
     0.06 0.03 0.10
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     == testthat results ===========================================================
     OK: 28 SKIPPED: 0 FAILED: 1
     1. Failure: Testing nnlm result (@test-nnlm.R#32)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 0.4.2
Check: running tests for arch ‘x64’
Result: ERROR
     Running 'testthat.R' [10s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(NNLM)
     >
     > test_check("NNLM")
     -- 1. Failure: Testing nnlm result (@test-nnlm.R#32) --------------------------
     as.vector(sol3) not equal to c(...).
     7/10 mismatches (average diff: 3.71)
     [1] 10.47 - 4.466 == 6
     [3] 5.42 - 9.422 == -4
     [4] 2.83 - 0.832 == 2
     [5] 9.04 - 6.036 == 3
     [7] 1.86 - 2.860 == -1
     [8] 7.32 - 4.318 == 3
     [9] 1.80 - 8.799 == -7
    
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     Non-negative matrix factorization:
     Algorithm: Sequential coordinate-wise descent
     Loss: Mean squared error
     MSE: 0.002684981
     MKL: 0.00207581
     Target: 0.002486645
     Rel. tol.: 9.84e-05
     Total epochs: 6177
     # Interation: 263
     Running time:
     user system elapsed
     0.06 0.03 0.08
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     0% 10 20 30 40 50 60 70 80 90 100%
     [----|----|----|----|----|----|----|----|----|----|
     **************************************************|
     == testthat results ===========================================================
     OK: 29 SKIPPED: 0 FAILED: 1
     1. Failure: Testing nnlm result (@test-nnlm.R#32)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-windows-ix86+x86_64