CRAN Package Check Results for Package bayestestR

Last updated on 2020-01-21 23:50:46 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.5.0 8.23 398.16 406.39 OK
r-devel-linux-x86_64-debian-gcc 0.5.0 6.48 185.13 191.61 ERROR
r-devel-linux-x86_64-fedora-clang 0.5.0 288.78 ERROR
r-devel-linux-x86_64-fedora-gcc 0.5.0 301.41 ERROR
r-devel-windows-ix86+x86_64 0.5.0 22.00 705.00 727.00 OK
r-devel-windows-ix86+x86_64-gcc8 0.5.0 19.00 757.00 776.00 OK
r-patched-linux-x86_64 0.5.0 6.46 219.12 225.58 ERROR
r-patched-solaris-x86 0.5.0 436.10 ERROR
r-release-linux-x86_64 0.5.0 7.62 220.00 227.62 ERROR
r-release-windows-ix86+x86_64 0.5.0 18.00 699.00 717.00 OK
r-release-osx-x86_64 0.5.0 OK
r-oldrel-windows-ix86+x86_64 0.5.0 16.00 633.00 649.00 OK
r-oldrel-osx-x86_64 0.5.0 OK

Check Details

Version: 0.5.0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘rstanarm’
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.5.0
Check: examples
Result: ERROR
    Running examples in ‘bayestestR-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: check_prior
    > ### Title: Check if Prior is Informative
    > ### Aliases: check_prior
    >
    > ### ** Examples
    >
    > library(bayestestR)
    > library(rstanarm)
    Error in library(rstanarm) : there is no package called ‘rstanarm’
    Execution halted
Flavors: r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.5.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [32s/52s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(bayestestR)
     >
     > test_check("bayestestR")
     ── 1. Error: bayesfactor_restricted RSTANARM (@test-bayesfactor_restricted.R#35)
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 2. Error: (unknown) (@test-ci.R#25) ────────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 3. Error: describe_posterior (@test-describe_posterior.R#28) ───────────────
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 4. Error: (unknown) (@test-describe_posterior.R#67) ────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 5. Error: (unknown) (@test-emmGrid.R#3) ────────────────────────────────────
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 6. Error: (unknown) (@test-hdi.R#22) ───────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 7. Error: map_estimate (@test-map_estimate.R#18) ───────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. testthat::expect_equal(...)
     5. bayestestR:::map_estimate.stanreg(m, effects = "all")
     10. insight:::get_parameters.stanreg(x, effects = effects, parameters = parameters)
     12. base::as.data.frame.default(x)
    
     ── 8. Error: (unknown) (@test-p_direction.R#17) ───────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 9. Error: (unknown) (@test-p_map.R#13) ─────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 10. Error: (unknown) (@test-p_significance.R#16) ───────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 11. Error: (unknown) (@test-point_estimate.R#5) ────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 12. Error: (unknown) (@test-rope.R#35) ─────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 124 | SKIPPED: 9 | WARNINGS: 9 | FAILED: 12 ]
     1. Error: bayesfactor_restricted RSTANARM (@test-bayesfactor_restricted.R#35)
     2. Error: (unknown) (@test-ci.R#25)
     3. Error: describe_posterior (@test-describe_posterior.R#28)
     4. Error: (unknown) (@test-describe_posterior.R#67)
     5. Error: (unknown) (@test-emmGrid.R#3)
     6. Error: (unknown) (@test-hdi.R#22)
     7. Error: map_estimate (@test-map_estimate.R#18)
     8. Error: (unknown) (@test-p_direction.R#17)
     9. Error: (unknown) (@test-p_map.R#13)
     1. ...
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.5.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘bayes_factors.Rmd’ using rmarkdown
    Quitting from lines 32-50 (bayes_factors.Rmd)
    Error: processing vignette 'bayes_factors.Rmd' failed with diagnostics:
    there is no package called 'rstanarm'
    --- failed re-building ‘bayes_factors.Rmd’
    
    --- re-building ‘bayestestR.Rmd’ using rmarkdown
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    Quitting from lines 154-160 (bayestestR.Rmd)
    Error: processing vignette 'bayestestR.Rmd' failed with diagnostics:
    there is no package called 'rstanarm'
    --- failed re-building ‘bayestestR.Rmd’
    
    --- re-building ‘credible_interval.Rmd’ using rmarkdown
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    Loading required namespace: logspline
    --- finished re-building ‘credible_interval.Rmd’
    
    --- re-building ‘example1.Rmd’ using rmarkdown
    Quitting from lines 45-48 (example1.Rmd)
    Error: processing vignette 'example1.Rmd' failed with diagnostics:
    there is no package called 'rstanarm'
    --- failed re-building ‘example1.Rmd’
    
    --- re-building ‘example2.Rmd’ using rmarkdown
    Loading required package: coda
    Loading required package: Matrix
    ************
    Welcome to BayesFactor 0.9.12-4.2. If you have questions, please contact Richard Morey (richarddmorey@gmail.com).
    
    Type BFManual() to open the manual.
    ************
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    Quitting from lines 187-190 (example2.Rmd)
    Error: processing vignette 'example2.Rmd' failed with diagnostics:
    there is no package called 'rstanarm'
    --- failed re-building ‘example2.Rmd’
    
    --- re-building ‘example3.Rmd’ using rmarkdown
    --- finished re-building ‘example3.Rmd’
    
    --- re-building ‘guidelines.Rmd’ using rmarkdown
    --- finished re-building ‘guidelines.Rmd’
    
    --- re-building ‘indicesEstimationComparison.Rmd’ using rmarkdown
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    --- finished re-building ‘indicesEstimationComparison.Rmd’
    
    --- re-building ‘indicesExistenceComparison.Rmd’ using rmarkdown
    --- finished re-building ‘indicesExistenceComparison.Rmd’
    
    --- re-building ‘probability_of_direction.Rmd’ using rmarkdown
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    KernSmooth 2.23 loaded
    Copyright M. P. Wand 1997-2009
    
    Attaching package: 'GGally'
    
    The following object is masked from 'package:dplyr':
    
     nasa
    
    `geom_smooth()` using method = 'loess' and formula 'y ~ x'
    --- finished re-building ‘probability_of_direction.Rmd’
    
    --- re-building ‘region_of_practical_equivalence.Rmd’ using rmarkdown
    Quitting from lines 93-100 (region_of_practical_equivalence.Rmd)
    Error: processing vignette 'region_of_practical_equivalence.Rmd' failed with diagnostics:
    there is no package called 'rstanarm'
    --- failed re-building ‘region_of_practical_equivalence.Rmd’
    
    SUMMARY: processing the following files failed:
     ‘bayes_factors.Rmd’ ‘bayestestR.Rmd’ ‘example1.Rmd’ ‘example2.Rmd’
     ‘region_of_practical_equivalence.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.5.0
Check: examples
Result: ERROR
    Running examples in ‘bayestestR-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: check_prior
    > ### Title: Check if Prior is Informative
    > ### Aliases: check_prior
    >
    > ### ** Examples
    >
    > library(bayestestR)
    > library(rstanarm)
    Error in library(rstanarm) : there is no package called ‘rstanarm’
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86

Version: 0.5.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [46s/60s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(bayestestR)
     >
     > test_check("bayestestR")
     ── 1. Error: bayesfactor_restricted RSTANARM (@test-bayesfactor_restricted.R#35)
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 2. Error: (unknown) (@test-ci.R#25) ────────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 3. Error: describe_posterior (@test-describe_posterior.R#28) ───────────────
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 4. Error: (unknown) (@test-describe_posterior.R#67) ────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 5. Error: (unknown) (@test-emmGrid.R#3) ────────────────────────────────────
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 6. Error: (unknown) (@test-hdi.R#22) ───────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 7. Error: map_estimate (@test-map_estimate.R#18) ───────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. testthat::expect_equal(...)
     5. bayestestR:::map_estimate.stanreg(m, effects = "all")
     10. insight:::get_parameters.stanreg(x, effects = effects, parameters = parameters)
     12. base::as.data.frame.default(x)
    
     ── 8. Error: (unknown) (@test-p_direction.R#17) ───────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 9. Error: (unknown) (@test-p_map.R#13) ─────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 10. Error: (unknown) (@test-p_significance.R#16) ───────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 11. Error: (unknown) (@test-point_estimate.R#5) ────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 12. Error: (unknown) (@test-rope.R#35) ─────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 124 | SKIPPED: 9 | WARNINGS: 9 | FAILED: 12 ]
     1. Error: bayesfactor_restricted RSTANARM (@test-bayesfactor_restricted.R#35)
     2. Error: (unknown) (@test-ci.R#25)
     3. Error: describe_posterior (@test-describe_posterior.R#28)
     4. Error: (unknown) (@test-describe_posterior.R#67)
     5. Error: (unknown) (@test-emmGrid.R#3)
     6. Error: (unknown) (@test-hdi.R#22)
     7. Error: map_estimate (@test-map_estimate.R#18)
     8. Error: (unknown) (@test-p_direction.R#17)
     9. Error: (unknown) (@test-p_map.R#13)
     1. ...
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.5.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘bayes_factors.Rmd’ using rmarkdown
    Quitting from lines 32-50 (bayes_factors.Rmd)
    Error: processing vignette 'bayes_factors.Rmd' failed with diagnostics:
    there is no package called 'rstanarm'
    --- failed re-building ‘bayes_factors.Rmd’
    
    --- re-building ‘bayestestR.Rmd’ using rmarkdown
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    Quitting from lines 154-160 (bayestestR.Rmd)
    Error: processing vignette 'bayestestR.Rmd' failed with diagnostics:
    there is no package called 'rstanarm'
    --- failed re-building ‘bayestestR.Rmd’
    
    --- re-building ‘credible_interval.Rmd’ using rmarkdown
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    Loading required namespace: logspline
    --- finished re-building ‘credible_interval.Rmd’
    
    --- re-building ‘example1.Rmd’ using rmarkdown
    Quitting from lines 45-48 (example1.Rmd)
    Error: processing vignette 'example1.Rmd' failed with diagnostics:
    there is no package called 'rstanarm'
    --- failed re-building ‘example1.Rmd’
    
    --- re-building ‘example2.Rmd’ using rmarkdown
    Loading required package: coda
    Loading required package: Matrix
    ************
    Welcome to BayesFactor 0.9.12-4.2. If you have questions, please contact Richard Morey (richarddmorey@gmail.com).
    
    Type BFManual() to open the manual.
    ************
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    Quitting from lines 187-190 (example2.Rmd)
    Error: processing vignette 'example2.Rmd' failed with diagnostics:
    there is no package called 'rstanarm'
    --- failed re-building ‘example2.Rmd’
    
    --- re-building ‘example3.Rmd’ using rmarkdown
    --- finished re-building ‘example3.Rmd’
    
    --- re-building ‘guidelines.Rmd’ using rmarkdown
    --- finished re-building ‘guidelines.Rmd’
    
    --- re-building ‘indicesEstimationComparison.Rmd’ using rmarkdown
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    --- finished re-building ‘indicesEstimationComparison.Rmd’
    
    --- re-building ‘indicesExistenceComparison.Rmd’ using rmarkdown
    --- finished re-building ‘indicesExistenceComparison.Rmd’
    
    --- re-building ‘probability_of_direction.Rmd’ using rmarkdown
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    KernSmooth 2.23 loaded
    Copyright M. P. Wand 1997-2009
    
    Attaching package: 'GGally'
    
    The following object is masked from 'package:dplyr':
    
     nasa
    
    `geom_smooth()` using method = 'loess' and formula 'y ~ x'
    --- finished re-building ‘probability_of_direction.Rmd’
    
    --- re-building ‘region_of_practical_equivalence.Rmd’ using rmarkdown
    Quitting from lines 93-100 (region_of_practical_equivalence.Rmd)
    Error: processing vignette 'region_of_practical_equivalence.Rmd' failed with diagnostics:
    there is no package called 'rstanarm'
    --- failed re-building ‘region_of_practical_equivalence.Rmd’
    
    SUMMARY: processing the following files failed:
     ‘bayes_factors.Rmd’ ‘bayestestR.Rmd’ ‘example1.Rmd’ ‘example2.Rmd’
     ‘region_of_practical_equivalence.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.5.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [50s/122s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(bayestestR)
     >
     > test_check("bayestestR")
     ── 1. Error: bayesfactor_restricted RSTANARM (@test-bayesfactor_restricted.R#35)
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 2. Error: (unknown) (@test-ci.R#25) ────────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 3. Error: describe_posterior (@test-describe_posterior.R#28) ───────────────
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 4. Error: (unknown) (@test-describe_posterior.R#67) ────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 5. Error: (unknown) (@test-emmGrid.R#3) ────────────────────────────────────
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 6. Error: (unknown) (@test-hdi.R#22) ───────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 7. Error: map_estimate (@test-map_estimate.R#18) ───────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. testthat::expect_equal(...)
     5. bayestestR:::map_estimate.stanreg(m, effects = "all")
     10. insight:::get_parameters.stanreg(x, effects = effects, parameters = parameters)
     12. base::as.data.frame.default(x)
    
     ── 8. Error: (unknown) (@test-p_direction.R#17) ───────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 9. Error: (unknown) (@test-p_map.R#13) ─────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 10. Error: (unknown) (@test-p_significance.R#16) ───────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 11. Error: (unknown) (@test-point_estimate.R#5) ────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 12. Error: (unknown) (@test-rope.R#35) ─────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 124 | SKIPPED: 9 | WARNINGS: 9 | FAILED: 12 ]
     1. Error: bayesfactor_restricted RSTANARM (@test-bayesfactor_restricted.R#35)
     2. Error: (unknown) (@test-ci.R#25)
     3. Error: describe_posterior (@test-describe_posterior.R#28)
     4. Error: (unknown) (@test-describe_posterior.R#67)
     5. Error: (unknown) (@test-emmGrid.R#3)
     6. Error: (unknown) (@test-hdi.R#22)
     7. Error: map_estimate (@test-map_estimate.R#18)
     8. Error: (unknown) (@test-p_direction.R#17)
     9. Error: (unknown) (@test-p_map.R#13)
     1. ...
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.5.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [36s/41s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(bayestestR)
     >
     > test_check("bayestestR")
     ── 1. Error: bayesfactor_restricted RSTANARM (@test-bayesfactor_restricted.R#35)
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 2. Error: (unknown) (@test-ci.R#25) ────────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 3. Error: describe_posterior (@test-describe_posterior.R#28) ───────────────
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 4. Error: (unknown) (@test-describe_posterior.R#67) ────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 5. Error: (unknown) (@test-emmGrid.R#3) ────────────────────────────────────
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 6. Error: (unknown) (@test-hdi.R#22) ───────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 7. Error: map_estimate (@test-map_estimate.R#18) ───────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. testthat::expect_equal(...)
     5. bayestestR:::map_estimate.stanreg(m, effects = "all")
     10. insight:::get_parameters.stanreg(x, effects = effects, parameters = parameters)
     12. base::as.data.frame.default(x)
    
     ── 8. Error: (unknown) (@test-p_direction.R#17) ───────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 9. Error: (unknown) (@test-p_map.R#13) ─────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 10. Error: (unknown) (@test-p_significance.R#16) ───────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 11. Error: (unknown) (@test-point_estimate.R#5) ────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 12. Error: (unknown) (@test-rope.R#35) ─────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 124 | SKIPPED: 9 | WARNINGS: 9 | FAILED: 12 ]
     1. Error: bayesfactor_restricted RSTANARM (@test-bayesfactor_restricted.R#35)
     2. Error: (unknown) (@test-ci.R#25)
     3. Error: describe_posterior (@test-describe_posterior.R#28)
     4. Error: (unknown) (@test-describe_posterior.R#67)
     5. Error: (unknown) (@test-emmGrid.R#3)
     6. Error: (unknown) (@test-hdi.R#22)
     7. Error: map_estimate (@test-map_estimate.R#18)
     8. Error: (unknown) (@test-p_direction.R#17)
     9. Error: (unknown) (@test-p_map.R#13)
     1. ...
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-linux-x86_64

Version: 0.5.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [61s/85s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(bayestestR)
     >
     > test_check("bayestestR")
     ── 1. Error: bayesfactor_restricted RSTANARM (@test-bayesfactor_restricted.R#35)
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 2. Error: (unknown) (@test-ci.R#25) ────────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 3. Error: describe_posterior (@test-describe_posterior.R#28) ───────────────
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 4. Error: (unknown) (@test-describe_posterior.R#67) ────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 5. Error: (unknown) (@test-emmGrid.R#3) ────────────────────────────────────
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 6. Error: (unknown) (@test-hdi.R#22) ───────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 7. Error: map_estimate (@test-map_estimate.R#18) ───────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. testthat::expect_equal(...)
     5. bayestestR:::map_estimate.stanreg(m, effects = "all")
     10. insight:::get_parameters.stanreg(x, effects = effects, parameters = parameters)
     12. base::as.data.frame.default(x)
    
     ── 8. Error: (unknown) (@test-p_direction.R#17) ───────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 9. Error: (unknown) (@test-p_map.R#13) ─────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 10. Error: (unknown) (@test-p_significance.R#16) ───────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 11. Error: (unknown) (@test-point_estimate.R#5) ────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 12. Error: (unknown) (@test-rope.R#35) ─────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 124 | SKIPPED: 9 | WARNINGS: 9 | FAILED: 12 ]
     1. Error: bayesfactor_restricted RSTANARM (@test-bayesfactor_restricted.R#35)
     2. Error: (unknown) (@test-ci.R#25)
     3. Error: describe_posterior (@test-describe_posterior.R#28)
     4. Error: (unknown) (@test-describe_posterior.R#67)
     5. Error: (unknown) (@test-emmGrid.R#3)
     6. Error: (unknown) (@test-hdi.R#22)
     7. Error: map_estimate (@test-map_estimate.R#18)
     8. Error: (unknown) (@test-p_direction.R#17)
     9. Error: (unknown) (@test-p_map.R#13)
     1. ...
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-solaris-x86

Version: 0.5.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘bayes_factors.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 32-50 (bayes_factors.Rmd)
    Error: processing vignette 'bayes_factors.Rmd' failed with diagnostics:
    there is no package called 'rstanarm'
    --- failed re-building ‘bayes_factors.Rmd’
    
    --- re-building ‘bayestestR.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    Quitting from lines 154-160 (bayestestR.Rmd)
    Error: processing vignette 'bayestestR.Rmd' failed with diagnostics:
    there is no package called 'rstanarm'
    --- failed re-building ‘bayestestR.Rmd’
    
    --- re-building ‘credible_interval.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    Loading required namespace: logspline
    --- finished re-building ‘credible_interval.Rmd’
    
    --- re-building ‘example1.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 45-48 (example1.Rmd)
    Error: processing vignette 'example1.Rmd' failed with diagnostics:
    there is no package called 'rstanarm'
    --- failed re-building ‘example1.Rmd’
    
    --- re-building ‘example2.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Loading required package: coda
    Loading required package: Matrix
    ************
    Welcome to BayesFactor 0.9.12-4.2. If you have questions, please contact Richard Morey (richarddmorey@gmail.com).
    
    Type BFManual() to open the manual.
    ************
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    Quitting from lines 187-190 (example2.Rmd)
    Error: processing vignette 'example2.Rmd' failed with diagnostics:
    there is no package called 'rstanarm'
    --- failed re-building ‘example2.Rmd’
    
    --- re-building ‘example3.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘example3.Rmd’
    
    --- re-building ‘guidelines.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘guidelines.Rmd’
    
    --- re-building ‘indicesEstimationComparison.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    --- finished re-building ‘indicesEstimationComparison.Rmd’
    
    --- re-building ‘indicesExistenceComparison.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘indicesExistenceComparison.Rmd’
    
    --- re-building ‘probability_of_direction.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    KernSmooth 2.23 loaded
    Copyright M. P. Wand 1997-2009
    
    Attaching package: 'GGally'
    
    The following object is masked from 'package:dplyr':
    
     nasa
    
    `geom_smooth()` using method = 'loess' and formula 'y ~ x'
    --- finished re-building ‘probability_of_direction.Rmd’
    
    --- re-building ‘region_of_practical_equivalence.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 93-100 (region_of_practical_equivalence.Rmd)
    Error: processing vignette 'region_of_practical_equivalence.Rmd' failed with diagnostics:
    there is no package called 'rstanarm'
    --- failed re-building ‘region_of_practical_equivalence.Rmd’
    
    SUMMARY: processing the following files failed:
     ‘bayes_factors.Rmd’ ‘bayestestR.Rmd’ ‘example1.Rmd’ ‘example2.Rmd’
     ‘region_of_practical_equivalence.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.5.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [37s/46s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(bayestestR)
     >
     > test_check("bayestestR")
     ── 1. Error: bayesfactor_restricted RSTANARM (@test-bayesfactor_restricted.R#35)
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 2. Error: (unknown) (@test-ci.R#25) ────────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 3. Error: describe_posterior (@test-describe_posterior.R#28) ───────────────
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 4. Error: (unknown) (@test-describe_posterior.R#67) ────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 5. Error: (unknown) (@test-emmGrid.R#3) ────────────────────────────────────
     there is no package called 'rstanarm'
     Backtrace:
     1. base::library(rstanarm)
    
     ── 6. Error: (unknown) (@test-hdi.R#22) ───────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 7. Error: map_estimate (@test-map_estimate.R#18) ───────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. testthat::expect_equal(...)
     5. bayestestR:::map_estimate.stanreg(m, effects = "all")
     10. insight:::get_parameters.stanreg(x, effects = effects, parameters = parameters)
     12. base::as.data.frame.default(x)
    
     ── 8. Error: (unknown) (@test-p_direction.R#17) ───────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 9. Error: (unknown) (@test-p_map.R#13) ─────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 10. Error: (unknown) (@test-p_significance.R#16) ───────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 11. Error: (unknown) (@test-point_estimate.R#5) ────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ── 12. Error: (unknown) (@test-rope.R#35) ─────────────────────────────────────
     cannot coerce class 'c("stanreg", "glm", "lm", "lmerMod")' to a data.frame
     Backtrace:
     1. insight::get_parameters(m, effects = "all")
     2. insight:::get_parameters.stanreg(m, effects = "all")
     4. base::as.data.frame.default(x)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 124 | SKIPPED: 9 | WARNINGS: 9 | FAILED: 12 ]
     1. Error: bayesfactor_restricted RSTANARM (@test-bayesfactor_restricted.R#35)
     2. Error: (unknown) (@test-ci.R#25)
     3. Error: describe_posterior (@test-describe_posterior.R#28)
     4. Error: (unknown) (@test-describe_posterior.R#67)
     5. Error: (unknown) (@test-emmGrid.R#3)
     6. Error: (unknown) (@test-hdi.R#22)
     7. Error: map_estimate (@test-map_estimate.R#18)
     8. Error: (unknown) (@test-p_direction.R#17)
     9. Error: (unknown) (@test-p_map.R#13)
     1. ...
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-release-linux-x86_64