CRAN Package Check Results for Package biofiles

Last updated on 2018-11-14 18:47:43 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.0 51.45 146.58 198.03 OK
r-devel-linux-x86_64-debian-gcc 1.0.0 43.96 116.93 160.89 OK
r-devel-linux-x86_64-fedora-clang 1.0.0 238.97 OK
r-devel-linux-x86_64-fedora-gcc 1.0.0 237.90 OK
r-devel-windows-ix86+x86_64 1.0.0 86.00 269.00 355.00 OK
r-patched-linux-x86_64 1.0.0 54.56 121.48 176.04 NOTE
r-patched-solaris-x86 1.0.0 273.40 OK
r-release-linux-x86_64 1.0.0 54.10 120.30 174.40 NOTE
r-release-windows-ix86+x86_64 1.0.0 121.00 244.00 365.00 OK
r-release-osx-x86_64 1.0.0 ERROR
r-oldrel-windows-ix86+x86_64 1.0.0 109.00 174.00 283.00 OK
r-oldrel-osx-x86_64 1.0.0 ERROR

Check Details

Version: 1.0.0
Check: DESCRIPTION meta-information
Result: NOTE
    Dependence on R version ‘3.3.1’ not with patchlevel 0
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.0.0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘BiocStyle’
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.0.0
Check: tests
Result: ERROR
     Running ‘test-all.R’ [9s/13s]
    Running the tests in ‘tests/test-all.R’ failed.
    Last 13 lines of output:
     ── 5. Failure: Location descriptors parse correctly (@test-01-gbLocation.r#17)
     `gbLocation("123^125")` threw an error with unexpected message.
     Expected match: "Inadmissible range"
     Actual message: "c++ exception (unknown reason)"
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 267 SKIPPED: 1 FAILED: 5
     1. Failure: Location descriptors parse correctly (@test-01-gbLocation.r#6)
     2. Failure: Location descriptors parse correctly (@test-01-gbLocation.r#9)
     3. Failure: Location descriptors parse correctly (@test-01-gbLocation.r#13)
     4. Failure: Location descriptors parse correctly (@test-01-gbLocation.r#14)
     5. Failure: Location descriptors parse correctly (@test-01-gbLocation.r#17)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-release-osx-x86_64

Version: 1.0.0
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Quitting from lines 10-11 (IntroBiofiles.Rnw)
    Error: processing vignette 'IntroBiofiles.Rnw' failed with diagnostics:
    there is no package called 'BiocStyle'
    Execution halted
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.0.0
Check: tests
Result: ERROR
     Running ‘test-all.R’ [7s/7s]
    Running the tests in ‘tests/test-all.R’ failed.
    Last 13 lines of output:
     ── 5. Failure: Location descriptors parse correctly (@test-01-gbLocation.r#17)
     `gbLocation("123^125")` threw an error with unexpected message.
     Expected match: "Inadmissible range"
     Actual message: "c++ exception (unknown reason)"
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 267 SKIPPED: 1 FAILED: 5
     1. Failure: Location descriptors parse correctly (@test-01-gbLocation.r#6)
     2. Failure: Location descriptors parse correctly (@test-01-gbLocation.r#9)
     3. Failure: Location descriptors parse correctly (@test-01-gbLocation.r#13)
     4. Failure: Location descriptors parse correctly (@test-01-gbLocation.r#14)
     5. Failure: Location descriptors parse correctly (@test-01-gbLocation.r#17)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-oldrel-osx-x86_64