Last updated on 2018-08-18 12:50:03 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2-5 | 27.57 | 337.40 | 364.97 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.2-5 | 25.08 | 261.45 | 286.53 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.2-5 | 429.76 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.2-5 | 431.39 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 0.2-5 | 81.00 | 755.00 | 836.00 | OK | |
| r-patched-linux-x86_64 | 0.2-5 | 29.89 | 324.03 | 353.92 | NOTE | |
| r-patched-solaris-x86 | 0.2-5 | 528.60 | NOTE | |||
| r-release-linux-x86_64 | 0.2-5 | 30.11 | 326.61 | 356.72 | NOTE | |
| r-release-windows-ix86+x86_64 | 0.2-5 | 72.00 | 737.00 | 809.00 | OK | |
| r-release-osx-x86_64 | 0.2-5 | ERROR | ||||
| r-oldrel-windows-ix86+x86_64 | 0.2-5 | 52.00 | 517.00 | 569.00 | OK | |
| r-oldrel-osx-x86_64 | 0.2-5 | NOTE |
Version: 0.2-5
Check: compiled code
Result: NOTE
File ‘evolqg/libs/evolqg.so’:
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.2-5
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘Rcpp’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64
Version: 0.2-5
Check: examples
Result: ERROR
Running examples in ‘evolqg-Ex.R’ failed
The error most likely occurred in:
> ### Name: LModularity
> ### Title: L Modularity
> ### Aliases: LModularity
>
> ### ** Examples
>
> # A modular matrix:
> modules = matrix(c(rep(c(1, 0, 0), each = 5),
+ rep(c(0, 1, 0), each = 5),
+ rep(c(0, 0, 1), each = 5)), 15)
> cor.hypot = CreateHypotMatrix(modules)[[4]]
> hypot.mask = matrix(as.logical(cor.hypot), 15, 15)
> mod.cor = matrix(NA, 15, 15)
> mod.cor[ hypot.mask] = runif(length(mod.cor[ hypot.mask]), 0.8, 0.9) # within-modules
> mod.cor[!hypot.mask] = runif(length(mod.cor[!hypot.mask]), 0.3, 0.4) # between-modules
> diag(mod.cor) = 1
> mod.cor = (mod.cor + t(mod.cor))/2 # correlation matrices should be symmetric
>
> LModularity(mod.cor)
Error in method(g, ...) :
At optimal_modularity.c:85 : GLPK is not available, Unimplemented function call
Calls: LModularity -> method
Execution halted
Flavor: r-release-osx-x86_64
Version: 0.2-5
Check: tests
Result: ERROR
Running ‘testthat.R’ [173s/275s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
Loading required package: plyr
── 1. Error: LModularity resturn resonable results (@test.LModularity.r#12) ───
At optimal_modularity.c:85 : GLPK is not available, Unimplemented function call
1: expect_equal(modules, LModularity(mod.cor)[[2]]) at testthat/test.LModularity.r:12
2: quasi_label(enquo(expected), expected.label)
3: eval_bare(get_expr(quo), get_env(quo))
4: LModularity(mod.cor)
5: method(g, ...)
══ testthat results ═══════════════════════════════════════════════════════════
OK: 20953 SKIPPED: 1 FAILED: 1
1. Error: LModularity resturn resonable results (@test.LModularity.r#12)
Error: testthat unit tests failed
Execution halted
Flavor: r-release-osx-x86_64