CRAN Package Check Results for Package kangar00

Last updated on 2018-11-17 13:47:32 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1 13.09 129.02 142.11 OK
r-devel-linux-x86_64-debian-gcc 1.1 10.90 104.61 115.51 ERROR
r-devel-linux-x86_64-fedora-clang 1.1 98.40 ERROR
r-devel-linux-x86_64-fedora-gcc 1.1 90.39 ERROR
r-devel-windows-ix86+x86_64 1.1 30.00 204.00 234.00 OK
r-patched-linux-x86_64 1.1 9.17 125.55 134.72 ERROR
r-patched-solaris-x86 1.1 220.60 ERROR
r-release-linux-x86_64 1.1 12.37 126.10 138.47 ERROR
r-release-windows-ix86+x86_64 1.1 29.00 204.00 233.00 OK
r-release-osx-x86_64 1.1 OK
r-oldrel-windows-ix86+x86_64 1.1 25.00 203.00 228.00 OK
r-oldrel-osx-x86_64 1.1 OK

Check Details

Version: 1.1
Check: examples
Result: ERROR
    Running examples in ‘kangar00-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: pathway_info
    > ### Title: An S4 class for an object assigning genes to pathways
    > ### Aliases: pathway_info pathway_info,character-method
    > ### show,pathway_info-method show,pathway_info,ANY-method
    > ### summary,pathway_info-method summary,pathway_info,ANY-method
    >
    > ### ** Examples
    >
    > pathway_info("hsa04022")
    Warning in scan(url(paste("http://togows.dbcls.jp/entry/pathway/", x, "/genes", :
     URL 'http://togows.dbcls.jp/entry/pathway/hsa04022/genes': status was 'Couldn't connect to server'
    Error in scan(url(paste("http://togows.dbcls.jp/entry/pathway/", x, "/genes", :
     cannot open the connection to 'http://togows.dbcls.jp/entry/pathway/hsa04022/genes'
    Calls: pathway_info ... gene_name_number -> gene_name_number -> .local -> scan
    Execution halted
Flavors: r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.1
Check: examples
Result: ERROR
    Running examples in ‘kangar00-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: pathway_info
    > ### Title: An S4 class for an object assigning genes to pathways
    > ### Aliases: pathway_info pathway_info,character-method
    > ### show,pathway_info-method show,pathway_info,ANY-method
    > ### summary,pathway_info-method summary,pathway_info,ANY-method
    >
    > ### ** Examples
    >
    > pathway_info("hsa04022")
    Warning in scan(url(paste("http://togows.dbcls.jp/entry/pathway/", x, "/genes", :
     URL 'http://togows.dbcls.jp/entry/pathway/hsa04022/genes': status was 'Couldn't connect to server'
    Error in scan(url(paste("http://togows.dbcls.jp/entry/pathway/", x, "/genes", :
     cannot open the connection to 'http://togows.dbcls.jp/entry/pathway/hsa04022/genes'
    Calls: pathway_info ... gene_name_number -> gene_name_number -> .local -> scan
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86