CRAN Package Check Results for Package netgwas

Last updated on 2018-11-21 15:47:32 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.7.0 6.67 126.93 133.60 OK
r-devel-linux-x86_64-debian-gcc 1.7.0 6.71 103.07 109.78 OK
r-devel-linux-x86_64-fedora-clang 1.7.0 160.49 OK
r-devel-linux-x86_64-fedora-gcc 1.7.0 156.99 OK
r-devel-windows-ix86+x86_64 1.7.0 16.00 137.00 153.00 OK
r-patched-linux-x86_64 1.7.0 7.76 125.33 133.09 OK
r-patched-solaris-x86 1.7.0 254.30 ERROR
r-release-linux-x86_64 1.7.0 6.55 124.79 131.34 OK
r-release-windows-ix86+x86_64 1.7.0 13.00 183.00 196.00 OK
r-release-osx-x86_64 1.7.0 OK
r-oldrel-windows-ix86+x86_64 1.7.0 14.00 183.00 197.00 OK
r-oldrel-osx-x86_64 1.7.0 OK

Additional issues

ATLAS MKL noLD

Check Details

Version: 1.7.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [54s/63s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(netgwas)
     >
     > test_check("netgwas")
     Constructing linkage map is in progress ...
    
     Constructing linkage map is done.
     ── 1. Failure: buildMap construction method works (@test_buildMap.R#10) ──────
     bm$map$markers not equal to structure(...).
     16 string mismatches
    
     Constructing linkage map is in progress ...
    
     Constructing linkage map is done.
     ── 2. Failure: npn map construction method works (@test_netmap.R#9) ──────────
     M1$map not equal to structure(...).
     Component "markers": 30 string mismatches
    
     Constructing linkage map is in progress:100%
     Constructing linkage map is done.
     Constructing linkage map is in progress:100%
     Constructing linkage map is done.
     Reconstructing genotype-phenotypes networks is in progress ...
    
     Reconstructing genotype-phenotype networks done.
    
     Reconstructing genotype-phenotypes networks is in progress ... :100%
     Reconstructing genotype-phenotypes networks done.
     Reconstructing intra- and inter- chromosomal interactions network is in progress ...
    
     Reconstructing intra- and inter- chromosomal interactions network done.
    
     Reconstructing inta- and inter- chromosomal interactions network is in progress:100%
     Reconstructing inta- and inter- chromosomal interactions network done.
     Reconstructing inta- and inter- chromosomal interactions network is in progress:100%
     Reconstructing inta- and inter- chromosomal interactions network done.
     Reconstructing intra- and inter- chromosomal interactions network is in progress ...
    
     Reconstructing intra- and inter- chromosomal interactions network done.
    
     Calculating extended Bayesian information criterion (ebic) selection ...done.
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 130 SKIPPED: 0 FAILED: 2
     1. Failure: buildMap construction method works (@test_buildMap.R#10)
     2. Failure: npn map construction method works (@test_netmap.R#9)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-solaris-x86