CRAN Package Check Results for Package psycho

Last updated on 2018-08-19 09:48:16 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.4 18.43 670.91 689.34 OK
r-devel-linux-x86_64-debian-gcc 0.3.4 10.54 458.90 469.44 OK
r-devel-linux-x86_64-fedora-clang 0.3.4 809.81 NOTE
r-devel-linux-x86_64-fedora-gcc 0.3.4 536.94 NOTE
r-devel-windows-ix86+x86_64 0.3.4 44.00 471.00 515.00 OK --no-vignettes
r-patched-linux-x86_64 0.3.4 11.28 558.67 569.95 OK
r-patched-solaris-x86 0.3.4 976.70 WARN
r-release-linux-x86_64 0.3.4 11.74 565.89 577.63 OK
r-release-windows-ix86+x86_64 0.3.4 41.00 300.00 341.00 OK --no-vignettes
r-release-osx-x86_64 0.3.4 WARN
r-oldrel-windows-ix86+x86_64 0.3.4 24.00 470.00 494.00 WARN --no-vignettes
r-oldrel-osx-x86_64 0.3.4 WARN

Check Details

Version: 0.3.4
Check: dependencies in R code
Result: NOTE
    Namespaces in Imports field not imported from:
     ‘methods’ ‘pbkrtest’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.3.4
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Loading required package: Rcpp
    rstanarm (Version 2.17.4, packaged: 2018-04-13 01:51:52 UTC)
    - Do not expect the default priors to remain the same in future rstanarm versions.
    Thus, R scripts should specify priors explicitly, even if they are just the defaults.
    - For execution on a local, multicore CPU with excess RAM we recommend calling
    options(mc.cores = parallel::detectCores())
    - Plotting theme set to bayesplot::theme_default().
    NOTE: As of emmeans versions > 1.2.3,
     The 'cld' function will be deprecated in favor of 'CLD'.
     You may use 'cld' only if you have package:multcomp attached.
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    Warning in ypredloo - y :
     longer object length is not a multiple of shorter object length
    Warning: There were 9 divergent transitions after warmup. Increasing adapt_delta above 0.95 may help. See
    http://mc-stan.org/misc/warnings.html#divergent-transitions-after-warmup
    Warning: Examine the pairs() plot to diagnose sampling problems
    
    Warning: Markov chains did not converge! Do not analyze results!
    Warning: There were 1 divergent transitions after warmup. Increasing adapt_delta above 0.95 may help. See
    http://mc-stan.org/misc/warnings.html#divergent-transitions-after-warmup
    Warning: Examine the pairs() plot to diagnose sampling problems
    
    
    Attaching package: 'plotly'
    
    The following object is masked from 'package:ggplot2':
    
     last_plot
    
    The following object is masked from 'package:stats':
    
     filter
    
    The following object is masked from 'package:graphics':
    
     layout
    
    Quitting from lines 512-540 (bayesian.Rmd)
    Error: processing vignette 'bayesian.Rmd' failed with diagnostics:
    there is no package called 'webshot'
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.3.4
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    The following object is masked from 'package:ggplot2':
    
     last_plot
    
    The following objects are masked from 'package:rstanarm':
    
     get_x, get_y
    
    The following object is masked from 'package:stats':
    
     filter
    
    The following object is masked from 'package:graphics':
    
     layout
    
    PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
    Warning in normalizePath(f2) :
     path[1]="./webshot72d81a053c10.png": No such file or directory
    Warning in file(con, "rb") :
     cannot open file './webshot72d81a053c10.png': No such file or directory
    Quitting from lines 512-540 (bayesian.Rmd)
    Error: processing vignette 'bayesian.Rmd' failed with diagnostics:
    cannot open the connection
    Execution halted
Flavor: r-release-osx-x86_64

Version: 0.3.4
Flags: --no-vignettes
Check: for unstated dependencies in examples
Result: WARN
    Warning in parse(file = files, n = -1L) :
     invalid input found on input connection 'psycho-Ex.R'
Flavor: r-oldrel-windows-ix86+x86_64

Version: 0.3.4
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    The following object is masked from 'package:ggplot2':
    
     last_plot
    
    The following objects are masked from 'package:rstanarm':
    
     get_x, get_y
    
    The following object is masked from 'package:stats':
    
     filter
    
    The following object is masked from 'package:graphics':
    
     layout
    
    PhantomJS not found. You can install it with webshot::install_phantomjs(). If it is installed, please make sure the phantomjs executable can be found via the PATH variable.
    Warning in normalizePath(f2) :
     path[1]="./webshotb0b22d566425.png": No such file or directory
    Warning in file(con, "rb") :
     cannot open file './webshotb0b22d566425.png': No such file or directory
    Quitting from lines 512-540 (bayesian.Rmd)
    Error: processing vignette 'bayesian.Rmd' failed with diagnostics:
    cannot open the connection
    Execution halted
Flavor: r-oldrel-osx-x86_64