Functions for Accurate and Speedy linkage map construction, manipulation and diagnosis of Doubled Haploid, Backcross and Recombinant Inbred 'R/qtl' objects. This includes extremely fast linkage map clustering and optimal marker ordering using 'MSTmap' (see Wu et al.,2008).
Version: | 1.0-7 |
Depends: | R (≥ 3.0.0), qtl, lattice |
Imports: | fields, RColorBrewer, gtools |
Suggests: | knitr, formatR, digest |
Published: | 2024-01-09 |
DOI: | 10.32614/CRAN.package.ASMap |
Author: | Julian Taylor, David Butler. |
Maintainer: | Julian Taylor <julian.taylor at adelaide.edu.au> |
License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
NeedsCompilation: | yes |
Citation: | ASMap citation info |
Materials: | README NEWS |
In views: | Agriculture |
CRAN checks: | ASMap results [issues need fixing before 2024-10-21] |
Reference manual: | ASMap.pdf |
Vignettes: |
Efficient linkage map construction using R/ASMap |
Package source: | ASMap_1.0-7.tar.gz |
Windows binaries: | r-devel: ASMap_1.0-7.zip, r-release: ASMap_1.0-7.zip, r-oldrel: ASMap_1.0-7.zip |
macOS binaries: | r-release (arm64): ASMap_1.0-7.tgz, r-oldrel (arm64): ASMap_1.0-7.tgz, r-release (x86_64): ASMap_1.0-7.tgz, r-oldrel (x86_64): ASMap_1.0-7.tgz |
Old sources: | ASMap archive |
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