OmopSketch: Characterise Tables of an OMOP Common Data Model Instance

Summarises key information in data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model. Assess suitability to perform specific epidemiological studies and explore the different domains to obtain feasibility counts and trends.

Version: 0.1.0
Depends: R (≥ 2.10)
Imports: CDMConnector (≥ 1.3.0), cli, clock, CohortCharacteristics, CohortConstructor, dplyr, ggplot2, omock (≥ 0.3.0), omopgenerics (≥ 0.3.1), PatientProfiles, purrr, rlang, stringr, tibble, tidyr, visOmopResults (≥ 0.4.0)
Suggests: CodelistGenerator, DBI, duckdb, flextable, gt, here, knitr, odbc, remotes, rmarkdown, RPostgres, testthat (≥ 3.0.0), withr
Published: 2024-09-26
DOI: 10.32614/CRAN.package.OmopSketch
Author: Marta Alcalde-Herraiz ORCID iD [aut, cre], Kim Lopez-Guell ORCID iD [aut], Elin Rowlands ORCID iD [aut], Edward Burn ORCID iD [aut], Martí Català ORCID iD [aut]
Maintainer: Marta Alcalde-Herraiz <marta.alcaldeherraiz at ndorms.ox.ac.uk>
BugReports: https://github.com/OHDSI/OmopSketch/issues
License: Apache License (≥ 2)
URL: https://OHDSI.github.io/OmopSketch/
NeedsCompilation: no
Materials: README
CRAN checks: OmopSketch results [issues need fixing before 2024-10-15]

Documentation:

Reference manual: OmopSketch.pdf
Vignettes: A-summarise_clinical_tables_records (source, R code)
B-summarise_concept_counts (source, R code)
C-summarise_pop_characteristics (source, R code)

Downloads:

Package source: OmopSketch_0.1.0.tar.gz
Windows binaries: r-devel: OmopSketch_0.1.0.zip, r-release: OmopSketch_0.1.0.zip, r-oldrel: OmopSketch_0.1.0.zip
macOS binaries: r-release (arm64): OmopSketch_0.1.0.tgz, r-oldrel (arm64): OmopSketch_0.1.0.tgz, r-release (x86_64): OmopSketch_0.1.0.tgz, r-oldrel (x86_64): OmopSketch_0.1.0.tgz

Linking:

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