SIMMS: Subnetwork Integration for Multi-Modal Signatures

Algorithms to create prognostic biomarkers using biological genesets or networks.

Version: 1.3.2
Depends: R (≥ 3.2.0), survival (≥ 2.36-2), MASS (≥ 7.3-12), glmnet (≥ 1.9-8), doParallel (≥ 1.0.10), foreach (≥ 1.4.3)
Imports: randomForestSRC (≥ 2.9.1)
Suggests: knitr (≥ 1.4), rmarkdown (≥ 0.9.5), xtable (≥ 1.7-4)
Published: 2022-04-24
DOI: 10.32614/CRAN.package.SIMMS
Author: Syed Haider [aut, cre], Paul C. Boutros [aut], Michal Grzadkowski [ctb]
Maintainer: Syed Haider <Syed.Haider at>
License: GPL-2
NeedsCompilation: no
Materials: NEWS
In views: Omics
CRAN checks: SIMMS results


Reference manual: SIMMS.pdf
Vignettes: SIMMS


Package source: SIMMS_1.3.2.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): SIMMS_1.3.2.tgz, r-oldrel (arm64): SIMMS_1.3.2.tgz, r-release (x86_64): SIMMS_1.3.2.tgz, r-oldrel (x86_64): SIMMS_1.3.2.tgz
Old sources: SIMMS archive


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