TKF: Pairwise Distance Estimation with TKF91 and TKF92 Model

Pairwise evolutionary distance estimation between protein sequences with the TKF91 and TKF92 model, which consider all the possible paths of transforming from one sequence to another.

Version: 0.0.8
Depends: R (≥ 3.0.2)
Imports: methods, expm, numDeriv, ape (≥ 3.2), phytools (≥ 0.4-45), phangorn (≥ 1.99-12)
Suggests: RUnit, seqinr
Published: 2015-04-18
Author: Ge Tan
Maintainer: Ge Tan <ge.tan09 at imperial.ac.uk>
License: GPL-2
NeedsCompilation: yes
SystemRequirements: gsl
CRAN checks: TKF results

Downloads:

Reference manual: TKF.pdf
Package source: TKF_0.0.8.tar.gz
Windows binaries: r-prerel: TKF_0.0.8.zip, r-release: TKF_0.0.8.zip, r-oldrel: TKF_0.0.8.zip
OS X binaries: r-prerel: TKF_0.0.8.tgz, r-release: TKF_0.0.8.tgz
Old sources: TKF archive

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