Contains logic for cell-specific gene set scoring of single cell RNA sequencing data.
| Version: | 0.5.2 |
| Depends: | R (≥ 3.6.0), MASS, Matrix |
| Imports: | methods (≥ 3.6.0) |
| Suggests: | Seurat (≥ 4.0.0), SeuratObject (≥ 4.0.0), sctransform (≥ 0.3.2) |
| Published: | 2021-03-15 |
| Author: | H. Robert Frost |
| Maintainer: | H. Robert Frost <rob.frost at dartmouth.edu> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| Copyright: | Dartmouth College |
| NeedsCompilation: | no |
| Materials: | NEWS |
| CRAN checks: | VAM results |
| Reference manual: | VAM.pdf |
| Vignettes: |
10x PBMC 3k log normalization Hallmark collection example 10x PBMC 3k log normalization example 10x PBMC 3k SCTransform example Seurat pbmc_small log normalization example Seurat pbmc_small SCTransform example |
| Package source: | VAM_0.5.2.tar.gz |
| Windows binaries: | r-devel: VAM_0.5.2.zip, r-release: VAM_0.5.2.zip, r-oldrel: VAM_0.5.2.zip |
| macOS binaries: | r-release: VAM_0.5.2.tgz, r-oldrel: VAM_0.5.2.tgz |
| Old sources: | VAM archive |
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