apex: Phylogenetic Methods for Multiple Gene Data

Toolkit for the analysis of multiple gene data. Apex implements the new S4 classes 'multidna', 'multiphyDat' and associated methods to handle aligned DNA sequences from multiple genes.

Version: 1.0.2
Depends: R (≥ 3.1.3), methods, ape, phangorn
Imports: utils, graphics, stats, grDevices, adegenet
Suggests: testthat, knitr, rmarkdown
Published: 2016-12-05
Author: Thibaut Jombart [aut, cre], Zhian Namir Kamvar [aut], Klaus Schliep [aut], Eric Archer [aut], Rebecca Harris [aut]
Maintainer: Thibaut Jombart <t.jombart at imperial.ac.uk>
BugReports: https://github.com/thibautjombart/apex/issues
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://github.com/thibautjombart/apex
NeedsCompilation: no
Materials: README
CRAN checks: apex results

Downloads:

Reference manual: apex.pdf
Vignettes: apex: Phylogenetic Methods for Multiple Gene Data.
Package source: apex_1.0.2.tar.gz
Windows binaries: r-devel: apex_1.0.2.zip, r-release: apex_1.0.2.zip, r-oldrel: apex_1.0.2.zip
OS X El Capitan binaries: r-release: apex_1.0.2.tgz
OS X Mavericks binaries: r-oldrel: apex_1.0.2.tgz
Old sources: apex archive

Reverse dependencies:

Reverse depends: strataG

Linking:

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