cytometree

CRAN_Status_Badge Travis-CI Build Status AppVeyor Build Status codecov.io Downloads

Overview

cytometree is a package which performs automatic gating and annotation of flow-cytometry data. On top of the CRAN help files, we also provide a vignette illustrating the functionnalities of cytometree.

The following article explains what cytometree is about:

D Commenges, C Alkhassim, R Gottardo, BP Hejblum, R Thiébaut, cytometree: a binary tree algorithm for automatic gating in cytometry analysis, 2017, in revision.

Installation

The easiest way to get cytometree is to install it from CRAN:

install.packages("cytometree")

Or to get the development version from GitHub:

#install.packages("devtools")
devtools::install_github("chariff/cytometree")

– Chariff Alkhassim & Boris Hejblum