fcros: A Method to Search for Differentially Expressed Genes and to Detect Recurrent Chromosomal Copy Number Aberrations

A fold change rank based method is presented to search for genes with changing expression and to detect recurrent chromosomal copy number aberrations. This method may be useful for high-throughput biological data (micro-array, sequencing, ...). Probabilities are associated with genes or probes in the data set and there is no problem of multiple tests when using this method. For array-based comparative genomic hybridization data, segmentation results are obtained by merging the significant probes detected.

Version: 1.6.1
Depends: R (≥ 3.1.0)
Published: 2019-05-31
DOI: 10.32614/CRAN.package.fcros
Author: Doulaye Dembele
Maintainer: Doulaye Dembele <doulaye at igbmc.fr>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
CRAN checks: fcros results


Reference manual: fcros.pdf


Package source: fcros_1.6.1.tar.gz
Windows binaries: r-devel: fcros_1.6.1.zip, r-release: fcros_1.6.1.zip, r-oldrel: fcros_1.6.1.zip
macOS binaries: r-release (arm64): fcros_1.6.1.tgz, r-oldrel (arm64): fcros_1.6.1.tgz, r-release (x86_64): fcros_1.6.1.tgz, r-oldrel (x86_64): fcros_1.6.1.tgz
Old sources: fcros archive


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