qtl2pattern: Pattern Support for 'qtl2' Package

Routines in 'qtl2' to study allele patterns in quantitative trait loci (QTL) mapping over a chromosome. Useful in crosses with more than two alleles to identify how sets of alleles, genetically different strands at the same locus, have different response levels. Plots show profiles over a chromosome. Can handle multiple traits together. See <https://github.com/byandell/qtl2pattern>.

Version: 1.2.1
Depends: R (≥ 3.1.0)
Imports: dplyr, tidyr, stringr, ggplot2, assertthat, qtl2, qtl2fst, fst, rlang, stats, graphics
Suggests: knitr, rmarkdown, qtl2ggplot
Published: 2023-03-11
DOI: 10.32614/CRAN.package.qtl2pattern
Author: Brian S Yandell [aut, cre]
Maintainer: Brian S Yandell <brian.yandell at wisc.edu>
License: GPL-3
URL: https://github.com/byandell/qtl2pattern
NeedsCompilation: no
CRAN checks: qtl2pattern results


Reference manual: qtl2pattern.pdf
Vignettes: demo qtl2pattern features


Package source: qtl2pattern_1.2.1.tar.gz
Windows binaries: r-devel: qtl2pattern_1.2.1.zip, r-release: qtl2pattern_1.2.1.zip, r-oldrel: qtl2pattern_1.2.1.zip
macOS binaries: r-release (arm64): qtl2pattern_1.2.1.tgz, r-oldrel (arm64): qtl2pattern_1.2.1.tgz, r-release (x86_64): qtl2pattern_1.2.1.tgz, r-oldrel (x86_64): qtl2pattern_1.2.1.tgz
Old sources: qtl2pattern archive


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